Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NAPA | STX6 | ENSDNOP00000033886 | ENSDNOP00000000932 | NSF attachment protein alpha. | Syntaxin 6. | 0.977 |
NAPA | STX7 | ENSDNOP00000033886 | ENSDNOP00000000225 | NSF attachment protein alpha. | Syntaxin 7. | 0.977 |
NAPA | STX8 | ENSDNOP00000033886 | ENSDNOP00000000861 | NSF attachment protein alpha. | Syntaxin 8. | 0.976 |
NAPA | VAMP4 | ENSDNOP00000033886 | ENSDNOP00000032662 | NSF attachment protein alpha. | Vesicle associated membrane protein 4. | 0.940 |
NAPA | VAMP7 | ENSDNOP00000033886 | ENSDNOP00000027655 | NSF attachment protein alpha. | Vesicle associated membrane protein 7. | 0.852 |
NAPA | VAMP8 | ENSDNOP00000033886 | ENSDNOP00000035081 | NSF attachment protein alpha. | Vesicle associated membrane protein 8. | 0.977 |
NAPA | VTI1A | ENSDNOP00000033886 | ENSDNOP00000020757 | NSF attachment protein alpha. | Vesicle transport through interaction with t-SNAREs 1A. | 0.988 |
NAPA | VTI1B | ENSDNOP00000033886 | ENSDNOP00000002810 | NSF attachment protein alpha. | Vesicle transport through interaction with t-SNAREs 1B. | 0.981 |
NAPA | YKT6 | ENSDNOP00000033886 | ENSDNOP00000011756 | NSF attachment protein alpha. | YKT6 v-SNARE homolog. | 0.985 |
NAPB | STX6 | ENSDNOP00000024305 | ENSDNOP00000000932 | NSF attachment protein beta. | Syntaxin 6. | 0.977 |
NAPB | STX7 | ENSDNOP00000024305 | ENSDNOP00000000225 | NSF attachment protein beta. | Syntaxin 7. | 0.977 |
NAPB | STX8 | ENSDNOP00000024305 | ENSDNOP00000000861 | NSF attachment protein beta. | Syntaxin 8. | 0.976 |
NAPB | VAMP4 | ENSDNOP00000024305 | ENSDNOP00000032662 | NSF attachment protein beta. | Vesicle associated membrane protein 4. | 0.940 |
NAPB | VAMP7 | ENSDNOP00000024305 | ENSDNOP00000027655 | NSF attachment protein beta. | Vesicle associated membrane protein 7. | 0.852 |
NAPB | VAMP8 | ENSDNOP00000024305 | ENSDNOP00000035081 | NSF attachment protein beta. | Vesicle associated membrane protein 8. | 0.977 |
NAPB | VTI1A | ENSDNOP00000024305 | ENSDNOP00000020757 | NSF attachment protein beta. | Vesicle transport through interaction with t-SNAREs 1A. | 0.988 |
NAPB | VTI1B | ENSDNOP00000024305 | ENSDNOP00000002810 | NSF attachment protein beta. | Vesicle transport through interaction with t-SNAREs 1B. | 0.981 |
NAPB | YKT6 | ENSDNOP00000024305 | ENSDNOP00000011756 | NSF attachment protein beta. | YKT6 v-SNARE homolog. | 0.985 |
STX6 | NAPA | ENSDNOP00000000932 | ENSDNOP00000033886 | Syntaxin 6. | NSF attachment protein alpha. | 0.977 |
STX6 | NAPB | ENSDNOP00000000932 | ENSDNOP00000024305 | Syntaxin 6. | NSF attachment protein beta. | 0.977 |
page 1 of 6