Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATF1 | CREB1 | ENSDNOP00000005383 | ENSDNOP00000006479 | Activating transcription factor 1. | cAMP responsive element binding protein 1. | 0.908 |
ATF1 | ENSDNOP00000001906 | ENSDNOP00000005383 | ENSDNOP00000001906 | Activating transcription factor 1. | annotation not available | 0.418 |
CREB1 | ATF1 | ENSDNOP00000006479 | ENSDNOP00000005383 | cAMP responsive element binding protein 1. | Activating transcription factor 1. | 0.908 |
CREB1 | CREM | ENSDNOP00000006479 | ENSDNOP00000000320 | cAMP responsive element binding protein 1. | cAMP responsive element modulator. | 0.822 |
CREB1 | ENSDNOP00000001906 | ENSDNOP00000006479 | ENSDNOP00000001906 | cAMP responsive element binding protein 1. | annotation not available | 0.418 |
CREM | CREB1 | ENSDNOP00000000320 | ENSDNOP00000006479 | cAMP responsive element modulator. | cAMP responsive element binding protein 1. | 0.822 |
CREM | ENSDNOP00000001906 | ENSDNOP00000000320 | ENSDNOP00000001906 | cAMP responsive element modulator. | annotation not available | 0.418 |
ENSDNOP00000001906 | ATF1 | ENSDNOP00000001906 | ENSDNOP00000005383 | annotation not available | Activating transcription factor 1. | 0.418 |
ENSDNOP00000001906 | CREB1 | ENSDNOP00000001906 | ENSDNOP00000006479 | annotation not available | cAMP responsive element binding protein 1. | 0.418 |
ENSDNOP00000001906 | CREM | ENSDNOP00000001906 | ENSDNOP00000000320 | annotation not available | cAMP responsive element modulator. | 0.418 |
ENSDNOP00000001906 | FECH | ENSDNOP00000001906 | ENSDNOP00000002709 | annotation not available | Ferrochelatase. | 0.520 |
ENSDNOP00000001906 | HMOX1 | ENSDNOP00000001906 | ENSDNOP00000026768 | annotation not available | Heme oxygenase 1. | 0.514 |
ENSDNOP00000001906 | HMOX2 | ENSDNOP00000001906 | ENSDNOP00000008910 | annotation not available | Heme oxygenase 2. | 0.514 |
ENSDNOP00000001906 | NCOA4 | ENSDNOP00000001906 | ENSDNOP00000010581 | annotation not available | Nuclear receptor coactivator 4. | 0.704 |
FECH | ENSDNOP00000001906 | ENSDNOP00000002709 | ENSDNOP00000001906 | Ferrochelatase. | annotation not available | 0.520 |
FECH | HMOX1 | ENSDNOP00000002709 | ENSDNOP00000026768 | Ferrochelatase. | Heme oxygenase 1. | 0.919 |
FECH | HMOX2 | ENSDNOP00000002709 | ENSDNOP00000008910 | Ferrochelatase. | Heme oxygenase 2. | 0.919 |
FECH | NCOA4 | ENSDNOP00000002709 | ENSDNOP00000010581 | Ferrochelatase. | Nuclear receptor coactivator 4. | 0.486 |
HMOX1 | ENSDNOP00000001906 | ENSDNOP00000026768 | ENSDNOP00000001906 | Heme oxygenase 1. | annotation not available | 0.514 |
HMOX1 | FECH | ENSDNOP00000026768 | ENSDNOP00000002709 | Heme oxygenase 1. | Ferrochelatase. | 0.919 |
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