STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (710 aa)    
Predicted Functional Partners:
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.999
LEO1
RNA polymerase-associated protein LEO1.
   
 0.999
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.998
SSRP1
Structure specific recognition protein 1.
   
 0.997
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 
 0.995
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.994
ENSDNOP00000012781
annotation not available
   
 
 0.990
CINP
Cyclin dependent kinase 2 interacting protein.
   
 0.985
ENSDNOP00000001029
annotation not available
   
 0.984
ENSDNOP00000033663
annotation not available
   
 0.984
Your Current Organism:
Dasypus novemcinctus
NCBI taxonomy Id: 9361
Other names: D. novemcinctus, nine-banded armadillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.