SPEG protein (Dasypus novemcinctus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SPEG

Striated muscle enriched protein kinase. (2564 aa)

Predicted Functional Partners:

ENSDNOP00000031870

0.866

WDR18

0.814

ENSDNOP00000025760

0.797

TEX10

0.782

PES1

0.750

ENSDNOP00000025361

0.750

TCAP

0.718

MYL1

0.700

HLA-DMA

0.695

MYLPF

0.695

Your Current Organism:

Dasypus novemcinctus

NCBI taxonomy Id: 9361
Other names: D. novemcinctus, nine-banded armadillo

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSDNOP00000025361	ENSDNOP00000031870	ENSDNOP00000025361	ENSDNOP00000031870	annotation not available	annotation not available	0.750
ENSDNOP00000025361	SPEG	ENSDNOP00000025361	ENSDNOP00000006297	annotation not available	Striated muscle enriched protein kinase.	0.750
ENSDNOP00000025361	TEX10	ENSDNOP00000025361	ENSDNOP00000008580	annotation not available	Testis expressed 10.	0.855
ENSDNOP00000025361	WDR18	ENSDNOP00000025361	ENSDNOP00000031120	annotation not available	WD repeat domain 18.	0.973
ENSDNOP00000025760	ENSDNOP00000031870	ENSDNOP00000025760	ENSDNOP00000031870	annotation not available	annotation not available	0.797
ENSDNOP00000025760	MYL1	ENSDNOP00000025760	ENSDNOP00000023175	annotation not available	Myosin light chain 1.	0.536
ENSDNOP00000025760	MYLPF	ENSDNOP00000025760	ENSDNOP00000011364	annotation not available	Myosin light chain, phosphorylatable, fast skeletal muscle.	0.567
ENSDNOP00000025760	SPEG	ENSDNOP00000025760	ENSDNOP00000006297	annotation not available	Striated muscle enriched protein kinase.	0.797
ENSDNOP00000031870	ENSDNOP00000025361	ENSDNOP00000031870	ENSDNOP00000025361	annotation not available	annotation not available	0.750
ENSDNOP00000031870	ENSDNOP00000025760	ENSDNOP00000031870	ENSDNOP00000025760	annotation not available	annotation not available	0.797
ENSDNOP00000031870	HLA-DMA	ENSDNOP00000031870	ENSDNOP00000001549	annotation not available	HLA class II histocompatibility antigen, DM alpha chain.	0.695
ENSDNOP00000031870	MYL1	ENSDNOP00000031870	ENSDNOP00000023175	annotation not available	Myosin light chain 1.	0.700
ENSDNOP00000031870	MYLPF	ENSDNOP00000031870	ENSDNOP00000011364	annotation not available	Myosin light chain, phosphorylatable, fast skeletal muscle.	0.695
ENSDNOP00000031870	PES1	ENSDNOP00000031870	ENSDNOP00000012184	annotation not available	Pescadillo ribosomal biogenesis factor 1.	0.750
ENSDNOP00000031870	SPEG	ENSDNOP00000031870	ENSDNOP00000006297	annotation not available	Striated muscle enriched protein kinase.	0.866
ENSDNOP00000031870	TCAP	ENSDNOP00000031870	ENSDNOP00000025256	annotation not available	Titin-cap.	0.718
ENSDNOP00000031870	TEX10	ENSDNOP00000031870	ENSDNOP00000008580	annotation not available	Testis expressed 10.	0.782
ENSDNOP00000031870	WDR18	ENSDNOP00000031870	ENSDNOP00000031120	annotation not available	WD repeat domain 18.	0.814
HLA-DMA	ENSDNOP00000031870	ENSDNOP00000001549	ENSDNOP00000031870	HLA class II histocompatibility antigen, DM alpha chain.	annotation not available	0.695
HLA-DMA	SPEG	ENSDNOP00000001549	ENSDNOP00000006297	HLA class II histocompatibility antigen, DM alpha chain.	Striated muscle enriched protein kinase.	0.695