STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP40Ubiquitin specific peptidase 40. (1042 aa)    
Predicted Functional Partners:
UBA52
ubiquitin-60S ribosomal protein L40.
    
 0.975
TP53
Tumor protein p53.
    
 0.974
ENSDNOP00000023177
annotation not available
 
     0.945
GMPS
Guanine monophosphate synthase.
   
 
 0.939
ENSDNOP00000028166
annotation not available
   
 0.926
UBC
Ubiquitin C.
   
 0.926
DNMT1
DNA methyltransferase 1.
   
 
 0.917
UVSSA
UV stimulated scaffold protein A.
    
 0.902
ENSDNOP00000000711
annotation not available
   
 0.889
RPS27A
Ribosomal protein S27a.
    
 0.879
Your Current Organism:
Dasypus novemcinctus
NCBI taxonomy Id: 9361
Other names: D. novemcinctus, nine-banded armadillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.