STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF149Ring finger protein 149. (397 aa)    
Predicted Functional Partners:
UBA52
ubiquitin-60S ribosomal protein L40.
    
 0.825
UBE2K
Ubiquitin conjugating enzyme E2 K.
    
 0.732
ENSDNOP00000000201
annotation not available
    
 0.688
UBE2Z
Ubiquitin conjugating enzyme E2 Z.
    
 0.681
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.663
RPS27A
Ribosomal protein S27a.
    
 0.637
ENSDNOP00000022298
annotation not available
    
 0.637
ENSDNOP00000029539
annotation not available
    
 0.637
ENSDNOP00000031924
annotation not available
    
 0.637
UBL4A
Ubiquitin like 4A.
    
  0.622
Your Current Organism:
Dasypus novemcinctus
NCBI taxonomy Id: 9361
Other names: D. novemcinctus, nine-banded armadillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.