Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSDNOP00000028166 | SMAD1 | ENSDNOP00000028166 | ENSDNOP00000024750 | annotation not available | SMAD family member 1. | 0.564 |
ENSDNOP00000028166 | SMAD7 | ENSDNOP00000028166 | ENSDNOP00000028921 | annotation not available | SMAD family member 7. | 0.695 |
ENSDNOP00000028166 | SMURF2 | ENSDNOP00000028166 | ENSDNOP00000033313 | annotation not available | SMAD specific E3 ubiquitin protein ligase 2. | 0.975 |
ENSDNOP00000028166 | TGFBR1 | ENSDNOP00000028166 | ENSDNOP00000024557 | annotation not available | Transforming growth factor beta receptor 1. | 0.736 |
ENSDNOP00000028166 | TRAF6 | ENSDNOP00000028166 | ENSDNOP00000021974 | annotation not available | TNF receptor associated factor 6. | 0.977 |
ENSDNOP00000028166 | UBA52 | ENSDNOP00000028166 | ENSDNOP00000021633 | annotation not available | ubiquitin-60S ribosomal protein L40. | 0.993 |
ENSDNOP00000028166 | USP15 | ENSDNOP00000028166 | ENSDNOP00000014980 | annotation not available | Ubiquitin specific peptidase 15. | 0.946 |
ENSDNOP00000028166 | USP4 | ENSDNOP00000028166 | ENSDNOP00000009927 | annotation not available | Ubiquitin specific peptidase 4. | 0.876 |
SART3 | USP15 | ENSDNOP00000015117 | ENSDNOP00000014980 | Spliceosome associated factor 3, U4/U6 recycling protein. | Ubiquitin specific peptidase 15. | 0.988 |
SART3 | USP4 | ENSDNOP00000015117 | ENSDNOP00000009927 | Spliceosome associated factor 3, U4/U6 recycling protein. | Ubiquitin specific peptidase 4. | 0.988 |
SMAD1 | ENSDNOP00000028166 | ENSDNOP00000024750 | ENSDNOP00000028166 | SMAD family member 1. | annotation not available | 0.564 |
SMAD1 | SMAD7 | ENSDNOP00000024750 | ENSDNOP00000028921 | SMAD family member 1. | SMAD family member 7. | 0.906 |
SMAD1 | SMURF2 | ENSDNOP00000024750 | ENSDNOP00000033313 | SMAD family member 1. | SMAD specific E3 ubiquitin protein ligase 2. | 0.974 |
SMAD1 | TGFBR1 | ENSDNOP00000024750 | ENSDNOP00000024557 | SMAD family member 1. | Transforming growth factor beta receptor 1. | 0.866 |
SMAD1 | UBC | ENSDNOP00000024750 | ENSDNOP00000030034 | SMAD family member 1. | Ubiquitin C. | 0.564 |
SMAD1 | USP15 | ENSDNOP00000024750 | ENSDNOP00000014980 | SMAD family member 1. | Ubiquitin specific peptidase 15. | 0.826 |
SMAD1 | USP4 | ENSDNOP00000024750 | ENSDNOP00000009927 | SMAD family member 1. | Ubiquitin specific peptidase 4. | 0.783 |
SMAD7 | ENSDNOP00000028166 | ENSDNOP00000028921 | ENSDNOP00000028166 | SMAD family member 7. | annotation not available | 0.695 |
SMAD7 | SMAD1 | ENSDNOP00000028921 | ENSDNOP00000024750 | SMAD family member 7. | SMAD family member 1. | 0.906 |
SMAD7 | SMURF2 | ENSDNOP00000028921 | ENSDNOP00000033313 | SMAD family member 7. | SMAD specific E3 ubiquitin protein ligase 2. | 0.999 |
page 1 of 5