Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDO | ERGIC2 | ENSDNOP00000025059 | ENSDNOP00000016292 | D-aspartate oxidase. | ERGIC and golgi 2. | 0.772 |
DDO | ERGIC3 | ENSDNOP00000025059 | ENSDNOP00000016027 | D-aspartate oxidase. | ERGIC and golgi 3. | 0.772 |
DDO | GTPBP3 | ENSDNOP00000025059 | ENSDNOP00000025056 | D-aspartate oxidase. | GTP binding protein 3, mitochondrial. | 0.879 |
DDO | PIPOX | ENSDNOP00000025059 | ENSDNOP00000007381 | D-aspartate oxidase. | Pipecolic acid and sarcosine oxidase. | 0.883 |
DDO | TRMU | ENSDNOP00000025059 | ENSDNOP00000025275 | D-aspartate oxidase. | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase. | 0.894 |
ENSDNOP00000009633 | ERGIC2 | ENSDNOP00000009633 | ENSDNOP00000016292 | annotation not available | ERGIC and golgi 2. | 0.720 |
ENSDNOP00000009633 | ERGIC3 | ENSDNOP00000009633 | ENSDNOP00000016027 | annotation not available | ERGIC and golgi 3. | 0.720 |
ENSDNOP00000021132 | ERGIC2 | ENSDNOP00000021132 | ENSDNOP00000016292 | annotation not available | ERGIC and golgi 2. | 0.772 |
ENSDNOP00000021132 | ERGIC3 | ENSDNOP00000021132 | ENSDNOP00000016027 | annotation not available | ERGIC and golgi 3. | 0.772 |
ENSDNOP00000021132 | GTPBP3 | ENSDNOP00000021132 | ENSDNOP00000025056 | annotation not available | GTP binding protein 3, mitochondrial. | 0.879 |
ENSDNOP00000021132 | PIPOX | ENSDNOP00000021132 | ENSDNOP00000007381 | annotation not available | Pipecolic acid and sarcosine oxidase. | 0.867 |
ENSDNOP00000021132 | TRMU | ENSDNOP00000021132 | ENSDNOP00000025275 | annotation not available | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase. | 0.894 |
ENSDNOP00000033695 | ERGIC2 | ENSDNOP00000033695 | ENSDNOP00000016292 | annotation not available | ERGIC and golgi 2. | 0.773 |
ENSDNOP00000033695 | ERGIC3 | ENSDNOP00000033695 | ENSDNOP00000016027 | annotation not available | ERGIC and golgi 3. | 0.754 |
ENSDNOP00000034809 | ERGIC2 | ENSDNOP00000034809 | ENSDNOP00000016292 | annotation not available | ERGIC and golgi 2. | 0.720 |
ENSDNOP00000034809 | ERGIC3 | ENSDNOP00000034809 | ENSDNOP00000016027 | annotation not available | ERGIC and golgi 3. | 0.720 |
ERGIC2 | DDO | ENSDNOP00000016292 | ENSDNOP00000025059 | ERGIC and golgi 2. | D-aspartate oxidase. | 0.772 |
ERGIC2 | ENSDNOP00000009633 | ENSDNOP00000016292 | ENSDNOP00000009633 | ERGIC and golgi 2. | annotation not available | 0.720 |
ERGIC2 | ENSDNOP00000021132 | ENSDNOP00000016292 | ENSDNOP00000021132 | ERGIC and golgi 2. | annotation not available | 0.772 |
ERGIC2 | ENSDNOP00000033695 | ENSDNOP00000016292 | ENSDNOP00000033695 | ERGIC and golgi 2. | annotation not available | 0.773 |
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