STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIHPeptidylprolyl isomerase H. (177 aa)    
Predicted Functional Partners:
PRPF3
pre-mRNA processing factor 3.
    
 0.998
PRPF4
pre-mRNA processing factor 4.
    
 0.998
PRPF31
pre-mRNA processing factor 31.
    
 0.997
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.985
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
  
 0.965
PRPF8
pre-mRNA processing factor 8.
   
 0.962
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.962
ENSDNOP00000016780
annotation not available
  
 0.959
ENSDNOP00000018549
annotation not available
  
 0.959
SNU13
Small nuclear ribonucleoprotein 13.
  
 0.959
Your Current Organism:
Dasypus novemcinctus
NCBI taxonomy Id: 9361
Other names: D. novemcinctus, nine-banded armadillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.