STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1CAProtein phosphatase 1 catalytic subunit alpha. (294 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.986
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.982
CPSF1
Cleavage and polyadenylation specific factor 1.
    
 0.981
CPSF2
Cleavage and polyadenylation specific factor 2.
   
 0.980
WDR33
WD repeat domain 33.
   
 0.978
SHOC2
SHOC2 leucine rich repeat scaffold protein.
    
 0.976
PPP1R3A
Protein phosphatase 1 regulatory subunit 3A.
    
 0.976
PPP1R7
Protein phosphatase 1 regulatory subunit 7.
   
 0.975
EIF2S1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.972
RB1
RB transcriptional corepressor 1.
   
 0.971
Your Current Organism:
Dasypus novemcinctus
NCBI taxonomy Id: 9361
Other names: D. novemcinctus, nine-banded armadillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.