STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101417003Collagen alpha-5(VI) chain-like. (1556 aa)    
Predicted Functional Partners:
ITGA6
Integrin subunit alpha 6.
    
 0.836
ITGB3
Integrin subunit beta 3.
    
 0.834
ITGAV
Integrin subunit alpha V.
   
 0.828
ITGA2B
Integrin subunit alpha 2b.
    
 0.812
ITGA5
Integrin subunit alpha 5.
    
 0.809
ITGB6
Integrin subunit beta 6.
    
 0.807
ITGB4
Integrin subunit beta 4.
    
 0.803
ITGB8
Integrin subunit beta 8.
    
 0.799
COL6A2
Collagen type VI alpha 2 chain.
   
0.793
ITGA11
Integrin subunit alpha 11.
    
 0.792
Your Current Organism:
Dasypus novemcinctus
NCBI taxonomy Id: 9361
Other names: D. novemcinctus, nine-banded armadillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.