STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101442617S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase. (768 aa)    
Predicted Functional Partners:
UROD
Uroporphyrinogen decarboxylase.
    
  0.902
PWP1
PWP1 homolog, endonuclein.
   
 
 0.783
ENSDNOP00000018720
annotation not available
  
 
 0.775
TRMT5
tRNA methyltransferase 5.
  
 
 0.770
NOL10
Nucleolar protein 10.
   
    0.712
TYW3
tRNA-yW synthesizing protein 3 homolog.
  
  
 0.699
ELP3
Elongator acetyltransferase complex subunit 3.
   
  
 0.692
WDR17
WD repeat domain 17.
   
 
 0.683
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
   0.647
ABCE1
ATP binding cassette subfamily E member 1.
   
  
 0.627
Your Current Organism:
Dasypus novemcinctus
NCBI taxonomy Id: 9361
Other names: D. novemcinctus, nine-banded armadillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.