STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMS1LIM zinc finger domain containing 1. (478 aa)    
Predicted Functional Partners:
ILK
Integrin linked kinase.
   
 0.991
RSU1
Ras suppressor protein 1.
   
 0.988
PARVA
Parvin alpha.
   
 0.956
PARVB
Parvin beta.
   
 0.956
NCK2
NCK adaptor protein 2.
    
 
 0.932
PARVG
Parvin gamma.
   
 0.912
GATD1
Glutamine amidotransferase like class 1 domain containing 1.
    
 0.899
ENSDNOP00000018717
annotation not available
   
 0.876
ENSDNOP00000031180
annotation not available
   
 0.876
TMEM203
Transmembrane protein 203.
   
 0.825
Your Current Organism:
Dasypus novemcinctus
NCBI taxonomy Id: 9361
Other names: D. novemcinctus, nine-banded armadillo
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.