Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD164L2 | SLC19A2 | ENSDNOP00000020484 | ENSDNOP00000014171 | CD164 molecule like 2. | Solute carrier family 19 member 2. | 0.416 |
CD164L2 | SLC19A3 | ENSDNOP00000020484 | ENSDNOP00000028902 | CD164 molecule like 2. | Solute carrier family 19 member 3. | 0.416 |
KMT2D | RARS2 | ENSDNOP00000021359 | ENSDNOP00000000415 | Lysine methyltransferase 2D. | arginyl-tRNA synthetase 2, mitochondrial. | 0.432 |
KMT2D | SLC19A3 | ENSDNOP00000021359 | ENSDNOP00000028902 | Lysine methyltransferase 2D. | Solute carrier family 19 member 3. | 0.432 |
KMT2D | TRIOBP | ENSDNOP00000021359 | ENSDNOP00000026592 | Lysine methyltransferase 2D. | TRIO and F-actin binding protein. | 0.488 |
NDE1 | RARS2 | ENSDNOP00000025766 | ENSDNOP00000000415 | nudE neurodevelopment protein 1. | arginyl-tRNA synthetase 2, mitochondrial. | 0.435 |
NDE1 | SLC19A3 | ENSDNOP00000025766 | ENSDNOP00000028902 | nudE neurodevelopment protein 1. | Solute carrier family 19 member 3. | 0.435 |
NDE1 | TRIOBP | ENSDNOP00000025766 | ENSDNOP00000026592 | nudE neurodevelopment protein 1. | TRIO and F-actin binding protein. | 0.537 |
NDE1 | USH2A | ENSDNOP00000025766 | ENSDNOP00000001875 | nudE neurodevelopment protein 1. | Usherin. | 0.400 |
RARS2 | KMT2D | ENSDNOP00000000415 | ENSDNOP00000021359 | arginyl-tRNA synthetase 2, mitochondrial. | Lysine methyltransferase 2D. | 0.432 |
RARS2 | NDE1 | ENSDNOP00000000415 | ENSDNOP00000025766 | arginyl-tRNA synthetase 2, mitochondrial. | nudE neurodevelopment protein 1. | 0.435 |
RARS2 | SLC19A3 | ENSDNOP00000000415 | ENSDNOP00000028902 | arginyl-tRNA synthetase 2, mitochondrial. | Solute carrier family 19 member 3. | 0.560 |
RARS2 | TRIOBP | ENSDNOP00000000415 | ENSDNOP00000026592 | arginyl-tRNA synthetase 2, mitochondrial. | TRIO and F-actin binding protein. | 0.560 |
RARS2 | UBR1 | ENSDNOP00000000415 | ENSDNOP00000007455 | arginyl-tRNA synthetase 2, mitochondrial. | Ubiquitin protein ligase E3 component n-recognin 1. | 0.412 |
RARS2 | USH2A | ENSDNOP00000000415 | ENSDNOP00000001875 | arginyl-tRNA synthetase 2, mitochondrial. | Usherin. | 0.509 |
SLC19A2 | CD164L2 | ENSDNOP00000014171 | ENSDNOP00000020484 | Solute carrier family 19 member 2. | CD164 molecule like 2. | 0.416 |
SLC19A2 | SLC19A3 | ENSDNOP00000014171 | ENSDNOP00000028902 | Solute carrier family 19 member 2. | Solute carrier family 19 member 3. | 0.741 |
SLC19A3 | CD164L2 | ENSDNOP00000028902 | ENSDNOP00000020484 | Solute carrier family 19 member 3. | CD164 molecule like 2. | 0.416 |
SLC19A3 | KMT2D | ENSDNOP00000028902 | ENSDNOP00000021359 | Solute carrier family 19 member 3. | Lysine methyltransferase 2D. | 0.432 |
SLC19A3 | NDE1 | ENSDNOP00000028902 | ENSDNOP00000025766 | Solute carrier family 19 member 3. | nudE neurodevelopment protein 1. | 0.435 |
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