Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BYSL | CMSS1 | ENSDNOP00000012916 | ENSDNOP00000030977 | Bystin like. | Cms1 ribosomal small subunit homolog. | 0.909 |
BYSL | DDX52 | ENSDNOP00000012916 | ENSDNOP00000030341 | Bystin like. | DExD-box helicase 52. | 0.986 |
BYSL | ESF1 | ENSDNOP00000012916 | ENSDNOP00000032641 | Bystin like. | ESF1 nucleolar pre-rRNA processing protein homolog. | 0.950 |
BYSL | LTV1 | ENSDNOP00000012916 | ENSDNOP00000029149 | Bystin like. | LTV1 ribosome biogenesis factor. | 0.999 |
BYSL | NOL10 | ENSDNOP00000012916 | ENSDNOP00000002761 | Bystin like. | Nucleolar protein 10. | 0.999 |
BYSL | NOP53 | ENSDNOP00000012916 | ENSDNOP00000004004 | Bystin like. | NOP53 ribosome biogenesis factor. | 0.921 |
BYSL | RBM28 | ENSDNOP00000012916 | ENSDNOP00000000860 | Bystin like. | RNA binding motif protein 28. | 0.919 |
BYSL | RPF2 | ENSDNOP00000012916 | ENSDNOP00000028498 | Bystin like. | Ribosome production factor 2 homolog. | 0.961 |
BYSL | UTP23 | ENSDNOP00000012916 | ENSDNOP00000025268 | Bystin like. | UTP23 small subunit processome component. | 0.802 |
BYSL | WDR36 | ENSDNOP00000012916 | ENSDNOP00000003536 | Bystin like. | WD repeat domain 36. | 0.999 |
CMSS1 | BYSL | ENSDNOP00000030977 | ENSDNOP00000012916 | Cms1 ribosomal small subunit homolog. | Bystin like. | 0.909 |
CMSS1 | DDX52 | ENSDNOP00000030977 | ENSDNOP00000030341 | Cms1 ribosomal small subunit homolog. | DExD-box helicase 52. | 0.815 |
CMSS1 | ESF1 | ENSDNOP00000030977 | ENSDNOP00000032641 | Cms1 ribosomal small subunit homolog. | ESF1 nucleolar pre-rRNA processing protein homolog. | 0.857 |
CMSS1 | LTV1 | ENSDNOP00000030977 | ENSDNOP00000029149 | Cms1 ribosomal small subunit homolog. | LTV1 ribosome biogenesis factor. | 0.892 |
CMSS1 | NOL10 | ENSDNOP00000030977 | ENSDNOP00000002761 | Cms1 ribosomal small subunit homolog. | Nucleolar protein 10. | 0.826 |
CMSS1 | NOP53 | ENSDNOP00000030977 | ENSDNOP00000004004 | Cms1 ribosomal small subunit homolog. | NOP53 ribosome biogenesis factor. | 0.898 |
CMSS1 | RBM28 | ENSDNOP00000030977 | ENSDNOP00000000860 | Cms1 ribosomal small subunit homolog. | RNA binding motif protein 28. | 0.832 |
CMSS1 | RPF2 | ENSDNOP00000030977 | ENSDNOP00000028498 | Cms1 ribosomal small subunit homolog. | Ribosome production factor 2 homolog. | 0.817 |
CMSS1 | UTP23 | ENSDNOP00000030977 | ENSDNOP00000025268 | Cms1 ribosomal small subunit homolog. | UTP23 small subunit processome component. | 0.869 |
CMSS1 | WDR36 | ENSDNOP00000030977 | ENSDNOP00000003536 | Cms1 ribosomal small subunit homolog. | WD repeat domain 36. | 0.838 |
page 1 of 6