STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH20Protocadherin 20. (953 aa)    
Predicted Functional Partners:
FJX1
Four-jointed box kinase 1.
   
 0.872
FRMD6
FERM domain containing 6.
    
 0.757
LIX1
Limb and CNS expressed 1.
   
 0.748
LIX1L
Limb and CNS expressed 1 like.
   
 0.748
RERE
Arginine-glutamic acid dipeptide repeats.
    
 0.719
ATN1
Atrophin 1.
    
 0.719
ENSDNOP00000032240
annotation not available
 
  
  0.617
ENSDNOP00000033022
annotation not available
 
  
 0.611
PCDH7
Protocadherin 7.
    
0.590
CENPA
Centromere protein A.
      
 0.582
Your Current Organism:
Dasypus novemcinctus
NCBI taxonomy Id: 9361
Other names: D. novemcinctus, nine-banded armadillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.