Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AASS | AGMAT | ENSDNOP00000010766 | ENSDNOP00000003044 | Aminoadipate-semialdehyde synthase. | Agmatinase. | 0.871 |
AASS | ARG1 | ENSDNOP00000010766 | ENSDNOP00000028669 | Aminoadipate-semialdehyde synthase. | Arginase 1. | 0.812 |
AASS | ARG2 | ENSDNOP00000010766 | ENSDNOP00000003709 | Aminoadipate-semialdehyde synthase. | Arginase 2. | 0.812 |
AASS | ENSDNOP00000032672 | ENSDNOP00000010766 | ENSDNOP00000032672 | Aminoadipate-semialdehyde synthase. | annotation not available | 0.743 |
AASS | SRM | ENSDNOP00000010766 | ENSDNOP00000010347 | Aminoadipate-semialdehyde synthase. | Spermidine synthase. | 0.933 |
AASS | TAT | ENSDNOP00000010766 | ENSDNOP00000012202 | Aminoadipate-semialdehyde synthase. | Tyrosine aminotransferase. | 0.815 |
AGMAT | AASS | ENSDNOP00000003044 | ENSDNOP00000010766 | Agmatinase. | Aminoadipate-semialdehyde synthase. | 0.871 |
AGMAT | ARG1 | ENSDNOP00000003044 | ENSDNOP00000028669 | Agmatinase. | Arginase 1. | 0.824 |
AGMAT | ARG2 | ENSDNOP00000003044 | ENSDNOP00000003709 | Agmatinase. | Arginase 2. | 0.825 |
AGMAT | ENSDNOP00000032672 | ENSDNOP00000003044 | ENSDNOP00000032672 | Agmatinase. | annotation not available | 0.715 |
AGMAT | SRM | ENSDNOP00000003044 | ENSDNOP00000010347 | Agmatinase. | Spermidine synthase. | 0.921 |
AGMAT | TAT | ENSDNOP00000003044 | ENSDNOP00000012202 | Agmatinase. | Tyrosine aminotransferase. | 0.543 |
ARG1 | AASS | ENSDNOP00000028669 | ENSDNOP00000010766 | Arginase 1. | Aminoadipate-semialdehyde synthase. | 0.812 |
ARG1 | AGMAT | ENSDNOP00000028669 | ENSDNOP00000003044 | Arginase 1. | Agmatinase. | 0.824 |
ARG1 | ARG2 | ENSDNOP00000028669 | ENSDNOP00000003709 | Arginase 1. | Arginase 2. | 0.856 |
ARG1 | ENSDNOP00000032672 | ENSDNOP00000028669 | ENSDNOP00000032672 | Arginase 1. | annotation not available | 0.694 |
ARG1 | SRM | ENSDNOP00000028669 | ENSDNOP00000010347 | Arginase 1. | Spermidine synthase. | 0.886 |
ARG1 | TAT | ENSDNOP00000028669 | ENSDNOP00000012202 | Arginase 1. | Tyrosine aminotransferase. | 0.658 |
ARG2 | AASS | ENSDNOP00000003709 | ENSDNOP00000010766 | Arginase 2. | Aminoadipate-semialdehyde synthase. | 0.812 |
ARG2 | AGMAT | ENSDNOP00000003709 | ENSDNOP00000003044 | Arginase 2. | Agmatinase. | 0.825 |
page 1 of 4