STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAPVD1GTPase activating protein and VPS9 domains 1. (1487 aa)    
Predicted Functional Partners:
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
   
 0.970
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.954
RAB5B
RAB5B, member RAS oncogene family.
    
 0.924
RAB17
RAB17, member RAS oncogene family.
    
 0.924
RAB5C
RAB5C, member RAS oncogene family.
    
 0.924
RAB5A
RAB5A, member RAS oncogene family.
    
 0.924
RAB31
RAB31, member RAS oncogene family.
    
 0.915
EIF2B2
Eukaryotic translation initiation factor 2B subunit beta.
    
   0.875
RAB21
RAB21, member RAS oncogene family.
   
 0.867
ENSDNOP00000029495
annotation not available
   
 0.867
Your Current Organism:
Dasypus novemcinctus
NCBI taxonomy Id: 9361
Other names: D. novemcinctus, nine-banded armadillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.