STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT25_013704Uncharacterized protein. (447 aa)    
Predicted Functional Partners:
CVT25_010741
Uncharacterized protein.
    
 0.908
CVT25_001154
Uncharacterized protein.
    
 0.908
CVT25_010430
Poly [ADP-ribose] polymerase.
    
 0.908
CVT25_001610
Uncharacterized protein.
     
 0.682
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
     
 0.682
CVT25_000618
Uncharacterized protein.
     
 0.682
CVT25_006520
DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.
     
 0.673
CVT25_001204
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.673
CVT25_003068
BRCT domain-containing protein.
     
 0.657
CVT25_008190
POLXc domain-containing protein.
     
 0.657
Your Current Organism:
Psilocybe cyanescens
NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.