STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT25_007107HDAC_interact domain-containing protein. (1246 aa)    
Predicted Functional Partners:
CVT25_004828
WD_REPEATS_REGION domain-containing protein.
    
 0.895
CVT25_014767
MRG domain-containing protein.
    
 0.888
CVT25_012591
PHD-type domain-containing protein.
   
 
 0.869
CVT25_014087
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.866
CVT25_014932
Hist_deacetyl domain-containing protein.
   
 0.866
CVT25_007462
Hist_deacetyl domain-containing protein.
   
 0.866
CVT25_007466
Hist_deacetyl domain-containing protein.
   
 0.866
CVT25_001582
Uncharacterized protein.
    
 0.856
CVT25_009475
Uncharacterized protein.
    
 0.856
CVT25_008341
Hist_deacetyl domain-containing protein.
   
 0.852
Your Current Organism:
Psilocybe cyanescens
NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.