STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT25_004624EAF domain-containing protein. (508 aa)    
Predicted Functional Partners:
CVT25_006417
Uncharacterized protein.
    
 0.974
CVT25_008536
TFIIS-type domain-containing protein.
    
 0.950
CVT25_005731
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.945
CVT25_008806
Uncharacterized protein.
    
 0.931
CVT25_010617
GCR1_C domain-containing protein.
    
 0.917
CVT25_005896
RPOLD domain-containing protein.
    
 0.901
CVT25_010907
Uncharacterized protein.
    
  0.887
CVT25_014554
Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
  0.887
CVT25_007050
Uncharacterized protein.
    
  0.887
CVT25_001296
RNA_pol_L_2 domain-containing protein.
    
  0.887
Your Current Organism:
Psilocybe cyanescens
NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481
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