CVT25_003082 protein (Psilocybe cyanescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CVT25_003082

Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (283 aa)

Predicted Functional Partners:

CVT25_005780

0.981

CVT25_012321

0.967

CVT25_001729

0.962

COQ5

0.962

CVT25_010836

0.960

CVT25_010363

0.960

CVT25_007609

0.916

CVT25_005976

0.912

CVT25_006944

0.897

CVT25_002494

0.847

Your Current Organism:

Psilocybe cyanescens

NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COQ5	CVT25_002494	A0A409XGB7	A0A409XUM9	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2); Belongs to the cullin family.	MPN domain-containing protein.	0.959
COQ5	CVT25_003082	A0A409XGB7	A0A409X4Y2	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2); Belongs to the cullin family.	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	0.962
COQ5	CVT25_005780	A0A409XGB7	A0A409VLN3	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2); Belongs to the cullin family.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.946
COQ5	CVT25_006944	A0A409XGB7	A0A409VSL8	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2); Belongs to the cullin family.	TIP120 domain-containing protein.	0.957
COQ5	CVT25_007609	A0A409XGB7	A0A409X1F9	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2); Belongs to the cullin family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.649
COQ5	CVT25_010363	A0A409XGB7	A0A409XP85	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2); Belongs to the cullin family.	Uncharacterized protein.	0.964
COQ5	CVT25_010836	A0A409XGB7	A0A409WF52	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2); Belongs to the cullin family.	RING-type domain-containing protein.	0.964
CVT25_001729	CVT25_002494	A0A409WPJ8	A0A409XUM9	CULLIN_2 domain-containing protein; Belongs to the cullin family.	MPN domain-containing protein.	0.959
CVT25_001729	CVT25_003082	A0A409WPJ8	A0A409X4Y2	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	0.962
CVT25_001729	CVT25_005780	A0A409WPJ8	A0A409VLN3	CULLIN_2 domain-containing protein; Belongs to the cullin family.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.946
CVT25_001729	CVT25_006944	A0A409WPJ8	A0A409VSL8	CULLIN_2 domain-containing protein; Belongs to the cullin family.	TIP120 domain-containing protein.	0.957
CVT25_001729	CVT25_007609	A0A409WPJ8	A0A409X1F9	CULLIN_2 domain-containing protein; Belongs to the cullin family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.649
CVT25_001729	CVT25_010363	A0A409WPJ8	A0A409XP85	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.964
CVT25_001729	CVT25_010836	A0A409WPJ8	A0A409WF52	CULLIN_2 domain-containing protein; Belongs to the cullin family.	RING-type domain-containing protein.	0.964
CVT25_002494	COQ5	A0A409XUM9	A0A409XGB7	MPN domain-containing protein.	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2); Belongs to the cullin family.	0.959
CVT25_002494	CVT25_001729	A0A409XUM9	A0A409WPJ8	MPN domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.959
CVT25_002494	CVT25_003082	A0A409XUM9	A0A409X4Y2	MPN domain-containing protein.	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	0.847
CVT25_002494	CVT25_005780	A0A409XUM9	A0A409VLN3	MPN domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.800
CVT25_002494	CVT25_005976	A0A409XUM9	A0A409VMD6	MPN domain-containing protein.	Uncharacterized protein.	0.946
CVT25_002494	CVT25_006944	A0A409XUM9	A0A409VSL8	MPN domain-containing protein.	TIP120 domain-containing protein.	0.719