STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT25_006433Uncharacterized protein. (722 aa)    
Predicted Functional Partners:
CVT25_009479
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.914
CVT25_014956
Uncharacterized protein.
    
 0.907
CVT25_008965
RNA helicase.
    
 0.904
CVT25_005586
U3 small nucleolar RNA-associated protein 22.
    
 
 0.847
CVT25_010299
RED_N domain-containing protein.
    
  0.843
CVT25_012176
Uncharacterized protein.
    
 
 0.841
CVT25_003443
Uncharacterized protein.
    
 
 0.835
CVT25_007024
MI domain-containing protein.
   
   0.835
CVT25_012080
Uncharacterized protein.
    
   0.833
CVT25_014553
S4 RNA-binding domain-containing protein.
    
   0.833
Your Current Organism:
Psilocybe cyanescens
NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.