CVT25_006498 protein (Psilocybe cyanescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CVT25_006498

Aldo_ket_red domain-containing protein. (291 aa)

Predicted Functional Partners:

CVT25_014505

0.826

CVT25_014066

0.701

CVT25_001970

0.625

CVT25_000058

0.624

CVT25_010739

0.498

CVT25_005963

0.485

CVT25_010952

0.485

CVT25_015047

0.485

CVT25_003928

0.485

CVT25_011418

0.483

Your Current Organism:

Psilocybe cyanescens

NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT25_000058	CVT25_001970	A0A409X8F5	A0A409WQN3	Hcy-binding domain-containing protein.	DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.	0.910
CVT25_000058	CVT25_003928	A0A409X8F5	A0A409XW37	Hcy-binding domain-containing protein.	Uncharacterized protein.	0.830
CVT25_000058	CVT25_005963	A0A409X8F5	A0A409VM80	Hcy-binding domain-containing protein.	CBM6 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	0.830
CVT25_000058	CVT25_006498	A0A409X8F5	A0A409XED2	Hcy-binding domain-containing protein.	Aldo_ket_red domain-containing protein.	0.624
CVT25_000058	CVT25_010952	A0A409X8F5	A0A409WFZ4	Hcy-binding domain-containing protein.	FAD-binding FR-type domain-containing protein.	0.830
CVT25_000058	CVT25_014066	A0A409X8F5	A0A409VPE4	Hcy-binding domain-containing protein.	Tryptophan synthase.	0.607
CVT25_000058	CVT25_015047	A0A409X8F5	A0A409WRW7	Hcy-binding domain-containing protein.	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Involved in ergosterol biosynthesis. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.830
CVT25_001970	CVT25_000058	A0A409WQN3	A0A409X8F5	DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.	Hcy-binding domain-containing protein.	0.910
CVT25_001970	CVT25_006498	A0A409WQN3	A0A409XED2	DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.	Aldo_ket_red domain-containing protein.	0.625
CVT25_001970	CVT25_014066	A0A409WQN3	A0A409VPE4	DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.	Tryptophan synthase.	0.603
CVT25_003928	CVT25_000058	A0A409XW37	A0A409X8F5	Uncharacterized protein.	Hcy-binding domain-containing protein.	0.830
CVT25_003928	CVT25_006498	A0A409XW37	A0A409XED2	Uncharacterized protein.	Aldo_ket_red domain-containing protein.	0.485
CVT25_005963	CVT25_000058	A0A409VM80	A0A409X8F5	CBM6 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	Hcy-binding domain-containing protein.	0.830
CVT25_005963	CVT25_006498	A0A409VM80	A0A409XED2	CBM6 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	Aldo_ket_red domain-containing protein.	0.485
CVT25_006498	CVT25_000058	A0A409XED2	A0A409X8F5	Aldo_ket_red domain-containing protein.	Hcy-binding domain-containing protein.	0.624
CVT25_006498	CVT25_001970	A0A409XED2	A0A409WQN3	Aldo_ket_red domain-containing protein.	DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.	0.625
CVT25_006498	CVT25_003928	A0A409XED2	A0A409XW37	Aldo_ket_red domain-containing protein.	Uncharacterized protein.	0.485
CVT25_006498	CVT25_005963	A0A409XED2	A0A409VM80	Aldo_ket_red domain-containing protein.	CBM6 domain-containing protein; Belongs to the glycosyl hydrolase 43 family.	0.485
CVT25_006498	CVT25_010739	A0A409XED2	A0A409WJN3	Aldo_ket_red domain-containing protein.	Uncharacterized protein.	0.498
CVT25_006498	CVT25_010952	A0A409XED2	A0A409WFZ4	Aldo_ket_red domain-containing protein.	FAD-binding FR-type domain-containing protein.	0.485