STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT25_006476E3 ubiquitin-protein ligase. (859 aa)    
Predicted Functional Partners:
CVT25_009875
Uncharacterized protein.
    
 0.942
CVT25_010298
Ubiquitin-like domain-containing protein.
    
 0.940
CVT25_008582
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.894
CVT25_012411
Uncharacterized protein.
    
 0.887
CVT25_012415
Protein kinase domain-containing protein.
    
 0.882
CVT25_003970
AN1-type domain-containing protein.
    
 0.857
CVT25_003335
Ubiquitin-like domain-containing protein.
    
 0.857
CVT25_001394
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
 0.856
CVT25_008398
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.846
CVT25_010678
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 0.837
Your Current Organism:
Psilocybe cyanescens
NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.