STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT25_010106RPN6_N domain-containing protein. (189 aa)    
Predicted Functional Partners:
CVT25_010963
MPN domain-containing protein.
   
 0.933
CVT25_014757
MPN domain-containing protein.
   
 0.931
CVT25_004319
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.926
CVT25_015595
Proteasome subunit alpha type.
   
 0.923
CVT25_012114
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.923
CVT25_013978
Uncharacterized protein.
   
 0.921
CVT25_005554
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.921
CVT25_010902
Proteasome subunit alpha type.
   
 0.920
CVT25_003429
Proteasome subunit alpha type.
   
 0.920
CVT25_009271
PCI domain-containing protein.
   
 0.918
Your Current Organism:
Psilocybe cyanescens
NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481
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