STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT25_011658Alpha-mann_mid domain-containing protein. (1140 aa)    
Predicted Functional Partners:
CVT25_008715
Uncharacterized protein.
     
 0.806
CVT25_009112
Glyco_hydro_85 domain-containing protein.
  
  
 0.696
CVT25_006306
Glyco_hydro_63 domain-containing protein.
   
  
 0.672
CVT25_011231
5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.
    
   0.662
CVT25_011619
Uncharacterized protein.
   
 
 0.625
CVT25_002672
Uncharacterized protein.
   
 
 0.625
CVT25_009269
Uncharacterized protein.
   
 
 0.618
CVT25_015756
acidPPc domain-containing protein.
   
  
 0.607
CVT25_008697
Uncharacterized protein; Belongs to the peptidase M18 family.
   
 
 0.580
CVT25_006122
RPOLD domain-containing protein.
    
   0.542
Your Current Organism:
Psilocybe cyanescens
NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481
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