STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PGZ6_SERL3Matrin-type domain-containing protein. (227 aa)    
Predicted Functional Partners:
F8Q5W2_SERL3
Uncharacterized protein.
   
 0.999
F8PPL8_SERL3
C2H2-type domain-containing protein.
    
 0.998
F8Q6N6_SERL3
Uncharacterized protein.
   
 0.997
F8Q8I8_SERL3
PSP domain-containing protein.
   
 0.996
F8QF15_SERL3
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.996
F8PMF2_SERL3
Uncharacterized protein.
    
 0.995
F8PNT6_SERL3
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.995
F8PV64_SERL3
CPSF_A domain-containing protein.
   
 0.995
F8Q8V3_SERL3
SF3b1 domain-containing protein.
    
 0.995
F8QHF7_SERL3
Uncharacterized protein.
    
 0.995
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.