STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PHE4_SERL3Uncharacterized protein. (1437 aa)    
Predicted Functional Partners:
F8PJE3_SERL3
WD_REPEATS_REGION domain-containing protein.
   
 0.999
F8PMT8_SERL3
BP28CT domain-containing protein.
   
 0.999
F8PQC3_SERL3
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
F8PQH0_SERL3
Uncharacterized protein.
   
 0.999
F8PRV5_SERL3
WD_REPEATS_REGION domain-containing protein.
   
  0.999
F8PU19_SERL3
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
F8Q1S2_SERL3
WD_REPEATS_REGION domain-containing protein.
   
 0.999
F8Q7J6_SERL3
CBF domain-containing protein.
   
 0.999
F8QDS0_SERL3
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
 0.999
F8QEX5_SERL3
WD_REPEATS_REGION domain-containing protein.
   
 0.999
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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