STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PHI0_SERL3Myb_DNA-bind_2 domain-containing protein. (490 aa)    
Predicted Functional Partners:
F8PTC4_SERL3
Uncharacterized protein.
    
 0.803
F8QIS5_SERL3
Uncharacterized protein.
    
 0.799
F8Q4T7_SERL3
DNA polymerase.
   
 0.787
F8QFG7_SERL3
ERCC4 domain-containing protein.
    
 0.767
F8PNL0_SERL3
Sm domain-containing protein.
    
  0.766
F8PGG6_SERL3
Small nuclear ribonucleoprotein Sm D2.
    
 0.762
F8PGG5_SERL3
FAD-binding PCMH-type domain-containing protein.
 
      0.728
F8PJ75_SERL3
ANK_REP_REGION domain-containing protein.
    
  0.723
F8QJB5_SERL3
ANK_REP_REGION domain-containing protein.
    
  0.723
F8Q3A4_SERL3
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.713
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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