STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PIW5_SERL3HMG box domain-containing protein. (541 aa)    
Predicted Functional Partners:
F8PP41_SERL3
Protein disulfide-isomerase.
    
   0.747
F8PP88_SERL3
HMG box domain-containing protein.
    
0.681
F8PEW1_SERL3
Uncharacterized protein.
    
 0.624
F8PNY5_SERL3
Uncharacterized protein.
    
 0.624
F8PXJ8_SERL3
PRK domain-containing protein.
    
 0.624
F8PTW5_SERL3
Uncharacterized protein.
    
  0.602
F8Q394_SERL3
HMG box domain-containing protein.
    
 0.600
F8Q7I3_SERL3
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.579
ATG22
Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
    
   0.568
F8QBW9_SERL3
Uncharacterized protein.
    
 0.512
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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