STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PJ78_SERL3RING-type domain-containing protein. (1767 aa)    
Predicted Functional Partners:
F8QI79_SERL3
HECT domain-containing protein.
   
 
 0.984
F8Q1C8_SERL3
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
    
 
 0.855
F8PQ86_SERL3
Uncharacterized protein.
   
   0.841
F8PNZ2_SERL3
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
    
   0.820
F8PNZ9_SERL3
Uncharacterized protein.
    
  0.820
F8PP00_SERL3
Uncharacterized protein.
    
  0.820
F8PFS6_SERL3
Uncharacterized protein.
    
   0.819
F8PGM6_SERL3
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
   0.819
F8PGM9_SERL3
Uncharacterized protein.
    
   0.819
F8PGX8_SERL3
Uncharacterized protein.
    
   0.819
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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