STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PK06_SERL3Uncharacterized protein. (334 aa)    
Predicted Functional Partners:
F8PQN3_SERL3
GP-PDE domain-containing protein.
    
 0.743
F8PQY6_SERL3
Uncharacterized protein.
    
 0.722
F8Q630_SERL3
Uncharacterized protein.
    
 0.667
F8PN74_SERL3
Serine/threonine-protein phosphatase.
    
  0.659
F8PUY1_SERL3
Uncharacterized protein.
    
 0.658
F8PTL4_SERL3
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.635
F8PTX3_SERL3
Ubiquitin carboxyl-terminal hydrolase.
    
  0.628
F8PQV3_SERL3
Ubiquitin-like domain-containing protein.
    
  0.607
F8Q7G2_SERL3
Uncharacterized protein; Belongs to the SKP1 family.
    
  0.605
F8Q7Y6_SERL3
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.605
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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