STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PKC8_SERL3Uncharacterized protein. (519 aa)    
Predicted Functional Partners:
F8QF08_SERL3
Uncharacterized protein.
    
  0.780
F8PKE3_SERL3
Ubiquitin-like domain-containing protein.
    
  0.779
F8Q3X5_SERL3
Ubiquitin-like domain-containing protein.
    
  0.779
F8PP18_SERL3
RFX-type winged-helix domain-containing protein.
    
 0.753
F8PNZ9_SERL3
Uncharacterized protein.
    
  0.750
F8PP00_SERL3
Uncharacterized protein.
    
  0.750
F8QD62_SERL3
Ubiquitin-like domain-containing protein.
    
  0.750
F8PJ75_SERL3
ANK_REP_REGION domain-containing protein.
    
 0.737
F8QJB5_SERL3
ANK_REP_REGION domain-containing protein.
    
 0.737
ATG16
Uncharacterized protein ATG16.
    
 0.734
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.