STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PMG4_SERL3Prenylcys_lyase domain-containing protein. (546 aa)    
Predicted Functional Partners:
F8PP70_SERL3
Uncharacterized protein.
 
      0.681
F8Q391_SERL3
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
      
 0.510
F8PW55_SERL3
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
      
 0.424
F8QBB8_SERL3
3'-5' exonuclease domain-containing protein.
      
 0.418
F8PYN1_SERL3
Uncharacterized protein.
   
  
 0.413
F8PUY9_SERL3
Uncharacterized protein.
      
 0.412
F8PUR3_SERL3
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
      
 0.404
F8Q5Z6_SERL3
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
      
 0.403
F8Q6H0_SERL3
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
      
 0.403
F8PHT7_SERL3
Uncharacterized protein.
      
 0.402
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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