STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PSF9_SERL3Uncharacterized protein. (546 aa)    
Predicted Functional Partners:
F8PMC0_SERL3
GHMP_kinases_N domain-containing protein.
 
 
 0.999
F8PKW6_SERL3
Homoserine dehydrogenase.
  
 0.991
F8PUX3_SERL3
Threonine dehydratase.
  
 
 0.973
F8Q736_SERL3
Aminotran_5 domain-containing protein.
   
 0.967
F8PJ57_SERL3
ACT domain-containing protein.
  
 0.962
F8PKF0_SERL3
PALP domain-containing protein.
  
 
 0.907
F8PKF2_SERL3
PALP domain-containing protein.
  
 
 0.907
F8PKX2_SERL3
Beta_elim_lyase domain-containing protein.
  
 0.889
F8PV46_SERL3
Uncharacterized protein.
  
 0.889
F8PVA6_SERL3
ACT domain-containing protein.
  
 
 0.871
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.