STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PTZ8_SERL3NACHT domain-containing protein. (392 aa)    
Predicted Functional Partners:
F8Q7C1_SERL3
B30.2/SPRY domain-containing protein.
    
 0.828
F8PQ39_SERL3
WD_REPEATS_REGION domain-containing protein.
    
 0.827
F8PTV0_SERL3
Uncharacterized protein.
    
 0.776
F8PTV1_SERL3
Uncharacterized protein.
    
 0.776
F8Q2Z9_SERL3
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.741
F8QA90_SERL3
Histone H2A; Belongs to the histone H2A family.
   
 0.740
F8Q5T1_SERL3
Uncharacterized protein.
   
 0.739
F8Q9G3_SERL3
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.739
F8Q9G6_SERL3
Uncharacterized protein.
    
  0.734
F8QEU6_SERL3
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.734
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.