STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PY16_SERL3Tudor domain-containing protein. (240 aa)    
Predicted Functional Partners:
F8PMF2_SERL3
Uncharacterized protein.
     
 0.981
F8PNT6_SERL3
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.978
F8PVI9_SERL3
Uncharacterized protein.
    
  0.977
F8QHF7_SERL3
Uncharacterized protein.
     
 0.977
F8Q7A0_SERL3
Uncharacterized protein.
   
 
  0.976
F8QJ48_SERL3
Uncharacterized protein.
   
 
  0.972
F8QCN7_SERL3
TPR_REGION domain-containing protein.
    
 
 0.944
F8PGZ6_SERL3
Matrin-type domain-containing protein.
    
  0.919
F8Q8V3_SERL3
SF3b1 domain-containing protein.
   
 0.874
F8QHM6_SERL3
Sm domain-containing protein.
   
 0.788
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.