STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8Q112_SERL3Uncharacterized protein. (150 aa)    
Predicted Functional Partners:
F8PQV3_SERL3
Ubiquitin-like domain-containing protein.
    
 0.998
F8PYV2_SERL3
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
  
 
 0.922
F8Q4M7_SERL3
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 
 0.922
F8QAI6_SERL3
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 
 0.922
F8PQ10_SERL3
Amidohydro-rel domain-containing protein; Belongs to the metallo-dependent hydrolases superfamily.
    
 0.845
F8PIQ2_SERL3
Uncharacterized protein.
    
 0.830
F8PKE3_SERL3
Ubiquitin-like domain-containing protein.
    
 0.830
F8PQW2_SERL3
SAM domain-containing protein.
    
 0.830
F8PQW3_SERL3
SH3 domain-containing protein.
    
 0.830
F8PSY3_SERL3
Uncharacterized protein.
    
 0.830
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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