F8QB38_SERL3 protein (Serpula lacrymans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

F8QB38_SERL3

Uncharacterized protein. (1012 aa)

Predicted Functional Partners:

F8QCI4_SERL3

0.967

F8Q5R2_SERL3

0.963

F8PNG9_SERL3

0.934

F8PIN6_SERL3

0.920

F8PL54_SERL3

0.895

F8PIE3_SERL3

0.851

F8Q2N7_SERL3

0.844

F8Q1H0_SERL3

0.842

F8PIL6_SERL3

0.839

F8PPV4_SERL3

0.824

Your Current Organism:

Serpula lacrymans

NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F8PIE3_SERL3	F8PIL6_SERL3	F8PIE3	F8PIL6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.879
F8PIE3_SERL3	F8PIN6_SERL3	F8PIE3	F8PIN6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.747
F8PIE3_SERL3	F8PL54_SERL3	F8PIE3	F8PL54	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Serine/threonine-protein kinase.	0.950
F8PIE3_SERL3	F8PNG9_SERL3	F8PIE3	F8PNG9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.830
F8PIE3_SERL3	F8PPV4_SERL3	F8PIE3	F8PPV4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.789
F8PIE3_SERL3	F8Q1H0_SERL3	F8PIE3	F8Q1H0	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.898
F8PIE3_SERL3	F8Q2N7_SERL3	F8PIE3	F8Q2N7	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.632
F8PIE3_SERL3	F8Q5R2_SERL3	F8PIE3	F8Q5R2	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.964
F8PIE3_SERL3	F8QB38_SERL3	F8PIE3	F8QB38	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.851
F8PIE3_SERL3	F8QCI4_SERL3	F8PIE3	F8QCI4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.888
F8PIL6_SERL3	F8PIE3_SERL3	F8PIL6	F8PIE3	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.879
F8PIL6_SERL3	F8PL54_SERL3	F8PIL6	F8PL54	Uncharacterized protein.	Serine/threonine-protein kinase.	0.863
F8PIL6_SERL3	F8Q1H0_SERL3	F8PIL6	F8Q1H0	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.995
F8PIL6_SERL3	F8Q5R2_SERL3	F8PIL6	F8Q5R2	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.795
F8PIL6_SERL3	F8QB38_SERL3	F8PIL6	F8QB38	Uncharacterized protein.	Uncharacterized protein.	0.839
F8PIN6_SERL3	F8PIE3_SERL3	F8PIN6	F8PIE3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.747
F8PIN6_SERL3	F8PL54_SERL3	F8PIN6	F8PL54	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Serine/threonine-protein kinase.	0.755
F8PIN6_SERL3	F8PNG9_SERL3	F8PIN6	F8PNG9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.640
F8PIN6_SERL3	F8PPV4_SERL3	F8PIN6	F8PPV4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.664
F8PIN6_SERL3	F8Q1H0_SERL3	F8PIN6	F8Q1H0	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.574