STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8QD60_SERL3Aldo_ket_red domain-containing protein. (357 aa)    
Predicted Functional Partners:
F8QCK3_SERL3
Ion_trans domain-containing protein.
    
 0.844
F8Q5T1_SERL3
Uncharacterized protein.
   
 0.724
F8Q2Z9_SERL3
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.721
F8Q2G7_SERL3
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.706
F8PIN5_SERL3
Uncharacterized protein.
    
  0.681
F8Q9E2_SERL3
Ribosomal protein L37; Binds to the 23S rRNA.
    
  0.681
F8Q9G3_SERL3
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.674
F8PJ83_SERL3
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.666
F8PZB5_SERL3
Uncharacterized protein.
   
 
  0.607
F8PSW7_SERL3
Uncharacterized protein; Belongs to the cytochrome b5 family.
   
 
 0.578
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.