STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000473125_01020Unannotated protein. (185 aa)    
Predicted Functional Partners:
GCA_000473125_01019
Unannotated protein.
 
  
  0.884
GCA_000473125_09178
Unannotated protein.
 
 
 0.665
GCA_000473125_01018
Unannotated protein.
   
  0.551
GCA_000473125_08663
Unannotated protein.
    
  0.543
GCA_000473125_04120
Unannotated protein.
    
  0.539
GCA_000473125_05627
Unannotated protein.
    
 0.534
GCA_000473125_05635
Unannotated protein.
  
  
 
0.530
GCA_000473125_04369
Unannotated protein.
  
 
 0.521
GCA_000473125_08982
Unannotated protein.
  
  
 
0.520
GCA_000473125_02286
Unannotated protein.
    
  0.507
Your Current Organism:
Bradyrhizobium genosp.
NCBI taxonomy Id: 936455
Other names: B. genosp. SA-4 str. CB756, Bradyrhizobium genosp. SA-4 str. CB756, Bradyrhizobium genosp. SA-4 str. USDA 3451, Bradyrhizobium genosp. SA-4 strain CB756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.