STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC6A16Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (398 aa)    
Predicted Functional Partners:
SLC6A8
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
  
  0.655
SLC6A6
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
  
  0.652
ENSEEUP00000002148
annotation not available
 
  
  0.650
METTL25
Methyltransferase-like protein 25.
      
 0.581
STX1B
syntaxin-1B; Belongs to the syntaxin family.
   
 0.554
ENSEEUP00000001285
annotation not available
    
 0.549
STX3
Syntaxin-3 isoform X1; Belongs to the syntaxin family.
    
 0.549
SLC6A2
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
     0.514
ENSEEUP00000002614
annotation not available
    
 
 0.511
STX11
Syntaxin 11.
    
 0.503
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.