STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS9A disintegrin and metalloproteinase with thrombospondin motifs 9. (1764 aa)    
Predicted Functional Partners:
B3GLCT
Beta-1,3-glucosyltransferase.
    
 0.625
NOSTRIN
Nostrin.
      
 0.616
ENSEEUP00000004814
annotation not available
     
 0.572
CCDC102A
Coiled-coil domain-containing protein 102A.
      
 0.555
BCAN
Brevican core protein isoform X2.
     
 0.544
SBSPON
Somatomedin B and thrombospondin type 1 domain containing.
     
 0.539
DHRS13
Dehydrogenase/reductase 13.
      
 0.532
HEG1
Protein HEG homolog 1 isoform X1.
    
 0.522
CDH23
Cadherin-23 isoform X1.
    
 
 0.518
ZNF608
Zinc finger protein 608 isoform X1.
      
 0.487
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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