STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103112706T-cell receptor-associated transmembrane adapter 1. (100 aa)    
Predicted Functional Partners:
ITK
Tyrosine-protein kinase.
   
 
 0.840
DZIP3
E3 ubiquitin-protein ligase DZIP3.
      
 0.765
MRPS23
28S ribosomal protein S23, mitochondrial.
      
 0.751
MORC1
MORC family CW-type zinc finger protein 1.
      
 0.721
UBASH3B
Ubiquitin-associated and SH3 domain-containing protein B isoform X2.
   
  
 0.695
TDRP
Testis development related protein.
      
 0.681
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
     
 0.670
CD3E
T-cell surface glycoprotein CD3 epsilon chain.
   
  
 0.651
ENSEEUP00000007255
annotation not available
     
 0.629
PIK3CA
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
     
 0.625
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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