STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000000551annotation not available (110 aa)    
Predicted Functional Partners:
UBA5
Ubiquitin-like modifier-activating enzyme 5 isoform X1.
  
 
 
 0.984
UFM1
Ubiquitin-fold modifier 1; Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post- translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes.
   
 
 0.959
ENSEEUP00000005812
annotation not available
    
 
 0.892
DDRGK1
DDRGK domain-containing protein 1.
    
 
 0.815
UFSP2
Ufm1-specific protease 2 isoform X1.
   
  
 0.776
SNTG1
Gamma-1-syntrophin.
      
 0.763
UBA6
Ubiquitin like modifier activating enzyme 6.
    
 
 0.737
UBA3
NEDD8-activating enzyme E1 catalytic subunit isoform X1.
    
 
 0.653
RLF
Zinc finger protein Rlf.
      
 0.637
ENSEEUP00000008547
annotation not available
      
 0.635
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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