STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000000585annotation not available (761 aa)    
Predicted Functional Partners:
PKD1
Polycystin-1 isoform X1.
 
  
 0.999
ENSEEUP00000013606
annotation not available
 
  
 0.927
TRPC1
Short transient receptor potential channel 1 isoform X1; Belongs to the transient receptor (TC 1.A.4) family.
    
 
 0.886
ARL13B
ADP-ribosylation factor-like protein 13B isoform X1.
      
 0.771
PKHD1
Fibrocystin.
      
 0.769
ENSEEUP00000003010
annotation not available
      
 0.766
ENSEEUP00000007745
annotation not available
    
 0.744
LOC103121375
Polycystic kidney disease and receptor for egg jelly-related protein-like.
    
0.744
ASAP1
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1.
     
 0.703
EXOC5
Exocyst complex component 5.
     
 0.703
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.