STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000000645annotation not available (588 aa)    
Predicted Functional Partners:
FANCD2
Fanconi anemia group D2 protein.
   
 0.816
FANCM
Fanconi anemia group M protein.
   
 
 0.786
POLG
DNA polymerase subunit gamma-1.
   
  
 0.766
FANCI
Fanconi anemia group I protein isoform X2.
   
 0.743
MRE11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
 0.729
ENSEEUP00000011645
annotation not available
   
 0.704
PCNA
Proliferating cell nuclear antigen.
  
 
 0.689
EXO1
Exonuclease 1.
  
 
 0.688
ENSEEUP00000000900
annotation not available
    
 0.681
TWNK
Twinkle protein, mitochondrial.
     
 0.678
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.