STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH19Protocadherin-19 isoform X1. (1142 aa)    
Predicted Functional Partners:
NCKAP1
Nck-associated protein 1.
    
 0.711
NCKAP1L
Nck-associated protein 1-like isoform X1.
    
 0.611
QRICH2
Glutamine-rich protein 2.
    
 0.528
ABI1
Abl interactor 1 isoform X10.
    
 0.521
SLC25A18
Mitochondrial glutamate carrier 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.511
ENSEEUP00000006207
annotation not available
    
 0.504
KCNT1
Potassium channel subfamily T member 1 isoform X1.
      
 0.495
MED12L
Mediator of RNA polymerase II transcription subunit 12-like protein.
      
 0.491
WDR45B
WD repeat domain phosphoinositide-interacting protein 3 isoform X1.
      
 0.489
LCN15
Lipocalin-15; Belongs to the calycin superfamily. Lipocalin family.
      
 0.485
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.