STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEEUP00000000723annotation not available (491 aa)    
Predicted Functional Partners:
SUSD1
Sushi domain containing 1.
     
 0.701
ISM1
Isthmin-1.
      
 0.596
TSR1
pre-rRNA-processing protein TSR1 homolog.
      
 0.489
PCIF1
Phosphorylated CTD-interacting factor 1.
      
 0.461
LUZP1
Leucine zipper protein 1.
      
 0.455
ENSEEUP00000013661
annotation not available
      
 0.455
ITIH1
Inter-alpha-trypsin inhibitor heavy chain H1 isoform X1.
      
 0.444
TM4SF1
Transmembrane 4 L6 family member 1.
      
 0.424
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.